QueryHeader Struct Reference

#include <ClientServerUtils.h>

List of all members.

Public Attributes
unsigned int	numQuerySeqs
unsigned int	numQueryWords
unsigned int	bitsPerSymbol
unsigned int	minPrint
unsigned int	maxGap
unsigned int	maxInsert
unsigned int	numRepeats
unsigned int	clipThreshold
unsigned int	maxMatches
unsigned int	substituteThreshold
unsigned int	bandExtension
SortModeType	sortMode
Friends
ostream &	operator<< (ostream &os, QueryHeader &q)

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Detailed Description

Definition at line 121 of file ClientServerUtils.h.

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Friends And Related Function Documentation

ostream& operator<<	(	ostream &	os,
		QueryHeader &	q
	)			[friend]

Definition at line 135 of file ClientServerUtils.h.

  {
    os << q.numQuerySeqs << " seqs " << q.numQueryWords << " words "
       << q.minPrint << "-" << q.maxGap << "-" << q.maxInsert << "-"
       << q.numRepeats << "-" << q.clipThreshold << "-" 
       << q.maxMatches << "-" << q.sortMode << "-"
       << q.substituteThreshold << "-" << q.bandExtension << endl;
  }

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Member Data Documentation

unsigned int QueryHeader::numQuerySeqs

Definition at line 123 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::numQueryWords

Definition at line 124 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::bitsPerSymbol

Definition at line 125 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::minPrint

Definition at line 126 of file ClientServerUtils.h.

Referenced by processQuery().

unsigned int QueryHeader::maxGap

Definition at line 127 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::maxInsert

Definition at line 128 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::numRepeats

Definition at line 129 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

unsigned int QueryHeader::clipThreshold

Definition at line 130 of file ClientServerUtils.h.

Referenced by processQuery().

unsigned int QueryHeader::maxMatches

Definition at line 131 of file ClientServerUtils.h.

Referenced by processQuery().

unsigned int QueryHeader::substituteThreshold

Definition at line 132 of file ClientServerUtils.h.

Referenced by processQuery().

unsigned int QueryHeader::bandExtension

Definition at line 133 of file ClientServerUtils.h.

Referenced by sendQuery().

SortModeType QueryHeader::sortMode

Definition at line 134 of file ClientServerUtils.h.

Referenced by processQuery(), and sendQuery().

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The documentation for this struct was generated from the following file:

• EnsemblServer/ClientServerUtils.h

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