CustomHitStore Struct Reference

Inheritance diagram for CustomHitStore:

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Collaboration diagram for CustomHitStore:

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List of all members.

Public Member Functions

virtual void addHit (const PositionInDatabase &hitPos, const SequenceOffset &queryPos)

Detailed Description

Definition at line 48 of file SSAHAWrapper.cpp.

Member Function Documentation

virtual void CustomHitStore::addHit ( const PositionInDatabase &  hitPos,
const SequenceOffset &  queryPos 
) [inline, virtual]

Reimplemented from HitListVector.

Definition at line 51 of file SSAHAWrapper.cpp.

References PositionInDatabase::offset, and PositionInDatabase::sequence.

00053   {
00054     push_back();
00055     back().seqNum = hitPos.sequence;
00056     back().seqPos = hitPos.offset;
00057   } // ~addHit

The documentation for this struct was generated from the following file:
Generated on Fri Dec 21 13:15:53 2007 for ssaha by  doxygen 1.5.2