ssaha File List

Here is a list of all files with brief descriptions:

EnsemblServer/ClientServerUtils.cpp [code]
EnsemblServer/ClientServerUtils.h [code]
EnsemblServer/OrderOrient.cpp [code]
EnsemblServer/SSAHAClient.cpp [code]
EnsemblServer/SSAHAClient.h [code]
EnsemblServer/SSAHAMainC.c [code]
EnsemblServer/SSAHAServer.cpp [code]
EnsemblServer/SSAHAServer.h [code]
EnsemblServer/SSAHAWrapper.cpp [code]
EnsemblServer/SSAHAWrapper.h [code]
Global/GlobalDefinitions.cpp [code]
Global/GlobalDefinitions.h [code]
Global/SSAHAMain.cpp [code]
Global/SSAHAMain.h [code]
Global/testTimeStamp.cpp [code]
Global/TimeStamp.cpp [code]
Global/TimeStamp.h [code]
HashTable/HashTable.cpp [code]
HashTable/HashTable.h [code]
HashTable/HashTableGeneric.cpp [code]
HashTable/HashTableGeneric.h [code]
HashTable/HashTablePacked.cpp [code]
HashTable/HashTablePacked.h [code]
HashTable/HashTableTranslated.cpp [code]
HashTable/HashTableTranslated.h [code]
HashTable/testHashTable.cpp [code]
HashTable/testHashTableNoOverlap.cpp [code]
QueryManager/MatchAligner.cpp [code]
QueryManager/MatchAligner.h [code]
QueryManager/MatchStore.cpp [code]
QueryManager/MatchStore.h [code]
QueryManager/MatchStoreGapped.cpp [code]
QueryManager/MatchStoreGapped.h [code]
QueryManager/MatchStoreUngapped.cpp [code]
QueryManager/MatchStoreUngapped.h [code]
QueryManager/QueryManager.cpp [code]
QueryManager/QueryManager.h [code]
QueryManager/testQueryManager.cpp [code]
SequenceReader/GenerateTestFastaFiles.cpp [code]
SequenceReader/GenerateTestFastaFiles.h [code]
SequenceReader/SequenceEncoder.cpp [code]
SequenceReader/SequenceEncoder.h [code]
SequenceReader/SequenceReader.cpp [code]
SequenceReader/SequenceReader.h [code]
SequenceReader/SequenceReaderFasta.cpp [code]
SequenceReader/SequenceReaderFasta.h [code]
SequenceReader/SequenceReaderFastq.cpp [code]
SequenceReader/SequenceReaderFastq.h [code]
SequenceReader/SequenceReaderFilter.cpp [code]
SequenceReader/SequenceReaderFilter.h [code]
SequenceReader/SequenceReaderLocal.cpp [code]
SequenceReader/SequenceReaderLocal.h [code]
SequenceReader/SequenceReaderMulti.cpp [code]
SequenceReader/SequenceReaderMulti.h [code]
SequenceReader/SequenceReaderString.cpp [code]
SequenceReader/SequenceReaderString.h [code]
SequenceReader/testSequenceReaderFasta.cpp [code]

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