MatchAlgorithm Member List

This is the complete list of members for MatchAlgorithm, including all inherited members.

generateHits(WordSequence &querySeq, HitListVector &hitList, HashTableGeneric &subjectTable)	MatchAlgorithm
generateMatches(HitListVector &hitList, MatchAdder &addMatch)=0	MatchAlgorithm	[pure virtual]
MatchAlgorithm(int numRepeats)	MatchAlgorithm	[inline]
numRepeats_	MatchAlgorithm	[protected]
operator()(WordSequence &querySeq, MatchAdder &addMatch, HashTableGeneric &subjectTable, int wordLength=-1, int stepLength=-1)	MatchAlgorithm
sortNeeded_	MatchAlgorithm	[protected]
stepLength_	MatchAlgorithm	[protected]
wordLength_	MatchAlgorithm	[protected]

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