CellFiller Class Reference

#include <MatchAligner.h>

List of all members.

Public Member Functions
	CellFiller (void)
ScoreType	operator() (PathType &cell, ScoreType scoreW, ScoreType scoreSW, ScoreType scoreN)
Private Attributes
ScoreType	max_

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Detailed Description

Definition at line 587 of file MatchAligner.h.

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Constructor & Destructor Documentation

CellFiller::CellFiller

(

void

)

[inline]

Definition at line 590 of file MatchAligner.h.

:  max_(0) {}

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Member Function Documentation

ScoreType CellFiller::operator()	(	PathType &	cell,
		ScoreType	scoreW,
		ScoreType	scoreSW,
		ScoreType	scoreN
	)			[inline]

Definition at line 592 of file MatchAligner.h.

References fromN, fromSW, fromW, and max_.

    {
      max_=max( max( scoreW, scoreSW), scoreN );
      cell |= fromW * (scoreW==max_);
      cell |= fromSW * (scoreSW==max_);
      cell |= fromN * (scoreN==max_);
      //      cout << "Cell: " 
      //   << ((cell & fromW)?'-':'.')
      //   << ((cell & fromSW)?'/':'.') 
      //   << ((cell & fromN)?'|':'.') 
      //   << " " << scoreW
      //   << " " << scoreSW
      //   << " " << scoreN 
      //   << " " << max_ << endl; 
      return max_;
    } // ~CellFiller::operator()

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Member Data Documentation

ScoreType CellFiller::max_ [private]

Definition at line 613 of file MatchAligner.h.

Referenced by operator()().

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The documentation for this class was generated from the following file:

• QueryManager/MatchAligner.h

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