statisticalParameters Struct Reference

#include <statistics.h>

Data Fields
char *	matrix
int2	startGap
int2	extendGap
float	lambda
float	K
float	H
float	alpha
float	beta

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Detailed Description

Definition at line 4 of file statistics.h.

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Field Documentation

char* statisticalParameters::matrix

Definition at line 6 of file statistics.h.

Referenced by statistics_lookupPrecomputedParams().

int2 statisticalParameters::startGap

Definition at line 7 of file statistics.h.

Referenced by statistics_lookupPrecomputedParams().

int2 statisticalParameters::extendGap

Definition at line 8 of file statistics.h.

Referenced by statistics_lookupPrecomputedParams().

float statisticalParameters::lambda

Definition at line 9 of file statistics.h.

Referenced by blast_search(), print_XMLfooter(), statistics_calcLengthAdjustNew(), statistics_gappedEvalue2nominal(), statistics_gappedNominal2normalized(), statistics_gappedNormalized2nominal(), and statistics_initialize().

float statisticalParameters::K

Definition at line 9 of file statistics.h.

Referenced by blast_search(), print_XMLfooter(), statistics_calcLengthAdjustNew(), and statistics_initialize().

float statisticalParameters::H

Definition at line 9 of file statistics.h.

Referenced by blast_search(), print_XMLfooter(), and statistics_initialize().

float statisticalParameters::alpha

Definition at line 10 of file statistics.h.

Referenced by statistics_calcLengthAdjustNew(), and statistics_initialize().

float statisticalParameters::beta

Definition at line 10 of file statistics.h.

Referenced by statistics_calcLengthAdjustNew(), and statistics_initialize().

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The documentation for this struct was generated from the following file:

• include/statistics.h

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