defaultPenalties Struct Reference

Data Fields
char *	scoringMatrix
int2	startGap
int2	extendGap
int2	semiGappedDifference

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Detailed Description

Definition at line 87 of file parameters.c.

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Field Documentation

char* defaultPenalties::scoringMatrix

Definition at line 89 of file parameters.c.

Referenced by parameters_getDefaultPenalties().

int2 defaultPenalties::startGap

Definition at line 90 of file parameters.c.

Referenced by parameters_loadDefaults().

int2 defaultPenalties::extendGap

Definition at line 91 of file parameters.c.

Referenced by parameters_loadDefaults().

int2 defaultPenalties::semiGappedDifference

Definition at line 92 of file parameters.c.

Referenced by parameters_loadDefaults().

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The documentation for this struct was generated from the following file:

• src/parameters.c

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