fsa-blast Data Structures

Here are the data structures with brief descriptions:

aaFrequencyGroup
alignment
Alphabet
argument
child
chunk
clusterWildcard
codeword
Configuration
coordinate
Database
defaultPenalties
diagonal
dpResults
edit
finalAlignment
finalList
gappedExtension
group
Hashcounter
index_scanner
indexCoordinate
initialQPosList
initialWord
listinfo
lo_info
longList
maskRegion
Matrix
memBlocks
memSingleBlock
neighbour
packedByte
parent
PerScoreVec
postingsList
PSSMatrix
queryPosition
queryWord
readFile
scoreMatrix
ScoreMatrix
ScoreVector
Segment
Sequence
sequence
sequenceData
sequenceLists
sequenceMatch
statisticalParameters
strlist
tableBlock
trace
TransVector
ungappedExtension
unpackRegion
vec
wild
wildcard
wildcardEdit
wildCode
wordList
wordLocation

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