protoGene Struct Reference

Collaboration diagram for protoGene:

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Data Fields
protoGene *	left
protoGene *	right
ffAli *	hits
DNA *	hStart
DNA *	hEnd
DNA *	nStart
DNA *	nEnd
int	score

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Detailed Description

Definition at line 870 of file fuzzyFind.c.

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Field Documentation

struct protoGene* protoGene::left [read]

Definition at line 872 of file fuzzyFind.c.

Referenced by lumpHits().

struct protoGene* protoGene::right [read]

Definition at line 873 of file fuzzyFind.c.

Referenced by bestMerger(), and lumpHits().

struct ffAli* protoGene::hits [read]

Definition at line 874 of file fuzzyFind.c.

Referenced by canAdd(), lumpHits(), and mergeProtoGenes().

DNA* protoGene::hStart

Definition at line 875 of file fuzzyFind.c.

Referenced by bestMerger(), canAdd(), lumpHits(), and mergeProtoGenes().

DNA * protoGene::hEnd

Definition at line 875 of file fuzzyFind.c.

Referenced by bestMerger(), canAdd(), lumpHits(), and mergeProtoGenes().

DNA * protoGene::nStart

Definition at line 875 of file fuzzyFind.c.

Referenced by bestMerger(), canAdd(), cmpProtoNeedle(), cmpProtoSize(), lumpHits(), and mergeProtoGenes().

DNA * protoGene::nEnd

Definition at line 875 of file fuzzyFind.c.

Referenced by bestMerger(), canAdd(), cmpProtoSize(), lumpHits(), and mergeProtoGenes().

int protoGene::score

Definition at line 876 of file fuzzyFind.c.

Referenced by cmpProtoScore().

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The documentation for this struct was generated from the following file:

• jkOwnLib/fuzzyFind.c

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