mrnaAli Struct Reference

#include <maDbRep.h>

Collaboration diagram for mrnaAli:

Collaboration graph
[legend]

Data Fields

mrnaAlinext
unsigned id
signed char readDir
signed char orientation
unsigned char hasIntrons
unsigned char isEst
int score
char qAcc [13]
unsigned qId
unsigned qTotalSize
unsigned qStart
unsigned qEnd
unsigned tStartBac
unsigned tStartPos
unsigned tEndBac
unsigned tEndPos
unsigned blockCount
unsigned * blockSizes
unsigned * qBlockStarts
unsigned * tBlockBacs
unsigned * tBlockStarts
unsigned short * startGoods
unsigned short * endGoods

Detailed Description

Definition at line 13 of file maDbRep.h.


Field Documentation

struct mrnaAli* mrnaAli::next [read]

Definition at line 16 of file maDbRep.h.

unsigned mrnaAli::id

Definition at line 17 of file maDbRep.h.

signed char mrnaAli::readDir

Definition at line 18 of file maDbRep.h.

signed char mrnaAli::orientation

Definition at line 19 of file maDbRep.h.

unsigned char mrnaAli::hasIntrons

Definition at line 20 of file maDbRep.h.

unsigned char mrnaAli::isEst

Definition at line 21 of file maDbRep.h.

int mrnaAli::score

Definition at line 22 of file maDbRep.h.

char mrnaAli::qAcc[13]

Definition at line 23 of file maDbRep.h.

unsigned mrnaAli::qId

Definition at line 24 of file maDbRep.h.

unsigned mrnaAli::qTotalSize

Definition at line 25 of file maDbRep.h.

unsigned mrnaAli::qStart

Definition at line 26 of file maDbRep.h.

unsigned mrnaAli::qEnd

Definition at line 27 of file maDbRep.h.

unsigned mrnaAli::tStartBac

Definition at line 28 of file maDbRep.h.

unsigned mrnaAli::tStartPos

Definition at line 29 of file maDbRep.h.

unsigned mrnaAli::tEndBac

Definition at line 30 of file maDbRep.h.

unsigned mrnaAli::tEndPos

Definition at line 31 of file maDbRep.h.

unsigned mrnaAli::blockCount

Definition at line 32 of file maDbRep.h.

unsigned* mrnaAli::blockSizes

Definition at line 33 of file maDbRep.h.

unsigned* mrnaAli::qBlockStarts

Definition at line 34 of file maDbRep.h.

unsigned* mrnaAli::tBlockBacs

Definition at line 35 of file maDbRep.h.

unsigned* mrnaAli::tBlockStarts

Definition at line 36 of file maDbRep.h.

unsigned short* mrnaAli::startGoods

Definition at line 37 of file maDbRep.h.

unsigned short* mrnaAli::endGoods

Definition at line 38 of file maDbRep.h.


The documentation for this struct was generated from the following file:
Generated on Tue Dec 25 20:26:35 2007 for blat by  doxygen 1.5.2