mafAli Struct Reference

#include <maf.h>

Collaboration diagram for mafAli:

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Data Fields
mafAli *	next
double	score
mafComp *	components
int	textSize

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Detailed Description

Definition at line 29 of file maf.h.

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Field Documentation

struct mafAli* mafAli::next [read]

Definition at line 32 of file maf.h.

Referenced by mafAliFreeList(), and mafWriteAll().

double mafAli::score

Definition at line 33 of file maf.h.

Referenced by mafFromAxt(), mafFromAxtTemp(), mafNextWithPos(), and mafWrite().

struct mafComp* mafAli::components [read]

Definition at line 34 of file maf.h.

Referenced by mafAliFree(), mafColMinMaxScore(), mafColumnEmpty(), mafFlipStrand(), mafFromAxt(), mafFromAxtTemp(), mafMayFindComponent(), mafMayFindComponentDb(), mafMayFindComponentInHash(), mafMayFindCompPrefix(), mafMayFindCompSpecies(), mafMoveComponentToTop(), mafNextWithPos(), mafScoreRangeMultiz(), mafStripEmptyColumns(), mafSubsetE(), and mafWrite().

int mafAli::textSize

Definition at line 35 of file maf.h.

Referenced by mafFlipStrand(), mafFromAxt(), mafFromAxtTemp(), mafNextWithPos(), mafScoreMultiz(), mafScoreRangeMultiz(), mafStripEmptyColumns(), and mafSubsetE().

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The documentation for this struct was generated from the following file:

• inc/maf.h

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