gapCalc Struct Reference


Data Fields

int smallSize
int * qSmall
int * tSmall
int * bSmall
int * longPos
double * qLong
double * tLong
double * bLong
int longCount
int qPosCount
int tPosCount
int bPosCount
int qLastPos
int tLastPos
int bLastPos
double qLastPosVal
double tLastPosVal
double bLastPosVal
double qLastSlope
double tLastSlope
double bLastSlope

Detailed Description

Definition at line 10 of file gapCalc.c.


Field Documentation

int gapCalc::smallSize

Definition at line 14 of file gapCalc.c.

Referenced by gapCalcCost(), and gapCalcRead().

int* gapCalc::qSmall

Definition at line 15 of file gapCalc.c.

Referenced by gapCalcCost(), gapCalcFree(), and gapCalcRead().

int* gapCalc::tSmall

Definition at line 16 of file gapCalc.c.

Referenced by gapCalcCost(), gapCalcFree(), and gapCalcRead().

int* gapCalc::bSmall

Definition at line 17 of file gapCalc.c.

Referenced by gapCalcCost(), gapCalcFree(), and gapCalcRead().

int* gapCalc::longPos

Definition at line 18 of file gapCalc.c.

Referenced by gapCalcCost(), and gapCalcFree().

double* gapCalc::qLong

Definition at line 19 of file gapCalc.c.

Referenced by gapCalcCost(), and gapCalcFree().

double* gapCalc::tLong

Definition at line 20 of file gapCalc.c.

Referenced by gapCalcCost(), and gapCalcFree().

double* gapCalc::bLong

Definition at line 21 of file gapCalc.c.

Referenced by gapCalcCost(), and gapCalcFree().

int gapCalc::longCount

Definition at line 22 of file gapCalc.c.

int gapCalc::qPosCount

Definition at line 23 of file gapCalc.c.

Referenced by gapCalcCost().

int gapCalc::tPosCount

Definition at line 24 of file gapCalc.c.

Referenced by gapCalcCost().

int gapCalc::bPosCount

Definition at line 25 of file gapCalc.c.

Referenced by gapCalcCost().

int gapCalc::qLastPos

Definition at line 26 of file gapCalc.c.

Referenced by gapCalcCost().

int gapCalc::tLastPos

Definition at line 27 of file gapCalc.c.

Referenced by gapCalcCost().

int gapCalc::bLastPos

Definition at line 28 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::qLastPosVal

Definition at line 29 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::tLastPosVal

Definition at line 30 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::bLastPosVal

Definition at line 31 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::qLastSlope

Definition at line 32 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::tLastSlope

Definition at line 33 of file gapCalc.c.

Referenced by gapCalcCost().

double gapCalc::bLastSlope

Definition at line 34 of file gapCalc.c.

Referenced by gapCalcCost().


The documentation for this struct was generated from the following file:
Generated on Tue Dec 25 20:25:38 2007 for blat by  doxygen 1.5.2