crudeAli Struct Reference

#include <crudeali.h>

Collaboration diagram for crudeAli:

[legend]

Data Fields
crudeAli *	next
int	chromIx
int	start
int	end
int	score
char	strand
int	qStart
int	qEnd

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Detailed Description

Definition at line 11 of file crudeali.h.

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Field Documentation

struct crudeAli* crudeAli::next [read]

Definition at line 14 of file crudeali.h.

Referenced by xenAlignBig(), and xenAlignWorm().

int crudeAli::chromIx

Definition at line 15 of file crudeali.h.

int crudeAli::start

Definition at line 16 of file crudeali.h.

Referenced by xenAlignBig().

int crudeAli::end

Definition at line 16 of file crudeali.h.

Referenced by xenAlignBig().

int crudeAli::score

Definition at line 17 of file crudeali.h.

char crudeAli::strand

Definition at line 18 of file crudeali.h.

Referenced by xenAlignBig().

int crudeAli::qStart

Definition at line 19 of file crudeali.h.

int crudeAli::qEnd

Definition at line 19 of file crudeali.h.

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The documentation for this struct was generated from the following file:

• inc/crudeali.h

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