inc/hmmstats.h

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00001 /*****************************************************************************
00002  * Copyright (C) 2000 Jim Kent.  This source code may be freely used         *
00003  * for personal, academic, and non-profit purposes.  Commercial use          *
00004  * permitted only by explicit agreement with Jim Kent (jim_kent@pacbell.net) *
00005  *****************************************************************************/
00006 /* hmmstats.h - Stuff for doing statistical analysis in general and 
00007  * hidden Markov models in particular. */
00008 #ifndef HMMSTATS_H
00009 #define HMMSTATS_H
00010 
00011 int scaledLog(double val);
00012 /* Return scaled log of val. */
00013 
00014 #define logScaleFactor 1000
00015 /* Amount we scale logs by. */
00016 
00017 double simpleGaussean(double x);
00018 /* Gaussean distribution with standard deviation 1 and mean 0. */
00019 
00020 double gaussean(double x, double mean, double sd);
00021 /* Gaussean distribution with mean and standard deviation at point x  */
00022 
00023 #endif /* HMMSTATS_H */
00024 

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