inc/hgGene.h File Reference

Go to the source code of this file.

Data Structures
struct	geneFinder
struct	hgGene
struct	hgTranscript
Defines
#define	geneFinderTabOut(el, f)   geneFinderOutput(el,f,'\t','\n');
#define	geneFinderCommaOut(el, f)   geneFinderOutput(el,f,',',',');
#define	hgGeneTabOut(el, f)   hgGeneOutput(el,f,'\t','\n');
#define	hgGeneCommaOut(el, f)   hgGeneOutput(el,f,',',',');
#define	hgTranscriptTabOut(el, f)   hgTranscriptOutput(el,f,'\t','\n');
#define	hgTranscriptCommaOut(el, f)   hgTranscriptOutput(el,f,',',',');
Functions
void	geneFinderStaticLoad (char **row, struct geneFinder *ret)
geneFinder *	geneFinderLoad (char **row)
geneFinder *	geneFinderCommaIn (char **pS)
void	geneFinderFree (struct geneFinder **pEl)
void	geneFinderFreeList (struct geneFinder **pList)
void	geneFinderOutput (struct geneFinder *el, FILE *f, char sep, char lastSep)
hgGene *	hgGeneLoad (char **row)
hgGene *	hgGeneCommaIn (char **pS)
void	hgGeneFree (struct hgGene **pEl)
void	hgGeneFreeList (struct hgGene **pList)
void	hgGeneOutput (struct hgGene *el, FILE *f, char sep, char lastSep)
hgTranscript *	hgTranscriptLoad (char **row)
hgTranscript *	hgTranscriptCommaIn (char **pS)
void	hgTranscriptFree (struct hgTranscript **pEl)
void	hgTranscriptFreeList (struct hgTranscript **pList)
void	hgTranscriptOutput (struct hgTranscript *el, FILE *f, char sep, char lastSep)

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Define Documentation

#define geneFinderCommaOut	(	el,
		f		)	geneFinderOutput(el,f,',',',');

Definition at line 42 of file hgGene.h.

#define geneFinderTabOut	(	el,
		f		)	geneFinderOutput(el,f,'\t','\n');

Definition at line 39 of file hgGene.h.

#define hgGeneCommaOut	(	el,
		f		)	hgGeneOutput(el,f,',',',');

Definition at line 81 of file hgGene.h.

#define hgGeneTabOut	(	el,
		f		)	hgGeneOutput(el,f,'\t','\n');

Definition at line 78 of file hgGene.h.

#define hgTranscriptCommaOut	(	el,
		f		)	hgTranscriptOutput(el,f,',',',');

Definition at line 127 of file hgGene.h.

#define hgTranscriptTabOut	(	el,
		f		)	hgTranscriptOutput(el,f,'\t','\n');

Definition at line 124 of file hgGene.h.

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Function Documentation

struct geneFinder* geneFinderCommaIn

(

char **

pS

)

[read]

void geneFinderFree

(

struct geneFinder **

pEl

)

void geneFinderFreeList

(

struct geneFinder **

pList

)

struct geneFinder* geneFinderLoad

(

char **

row

)

[read]

void geneFinderOutput	(	struct geneFinder *	el,
		FILE *	f,
		char	sep,
		char	lastSep
	)

void geneFinderStaticLoad	(	char **	row,
		struct geneFinder *	ret
	)

struct hgGene* hgGeneCommaIn

(

char **

pS

)

[read]

void hgGeneFree

(

struct hgGene **

pEl

)

void hgGeneFreeList

(

struct hgGene **

pList

)

struct hgGene* hgGeneLoad

(

char **

row

)

[read]

void hgGeneOutput	(	struct hgGene *	el,
		FILE *	f,
		char	sep,
		char	lastSep
	)

struct hgTranscript* hgTranscriptCommaIn

(

char **

pS

)

[read]

void hgTranscriptFree

(

struct hgTranscript **

pEl

)

void hgTranscriptFreeList

(

struct hgTranscript **

pList

)

struct hgTranscript* hgTranscriptLoad

(

char **

row

)

[read]

void hgTranscriptOutput	(	struct hgTranscript *	el,
		FILE *	f,
		char	sep,
		char	lastSep
	)

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