lib/aliType.c File Reference

#include "common.h"
#include "aliType.h"

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Functions
char *	gfTypeName (enum gfType type)
enum gfType	gfTypeFromName (char *name)
Variables
static char const	rcsid [] = "$Id: aliType.c,v 1.4 2003/05/06 07:33:41 kate Exp $"

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Function Documentation

enum gfType gfTypeFromName

(

char *

name

)

Definition at line 19 of file aliType.c.

References errAbort(), gftDna, gftDnaX, gftProt, gftRna, gftRnaX, and sameWord.

Referenced by gfClient(), main(), pslxFileOpen(), and pslxFileOpenWithMetaConfig().

{
if (sameWord(name, "DNA")) return gftDna;
if (sameWord(name, "RNA")) return gftRna;
if (sameWord(name, "protein")) return gftProt;
if (sameWord(name, "prot")) return gftProt;
if (sameWord(name, "DNAX")) return gftDnaX;
if (sameWord(name, "RNAX")) return gftRnaX;
errAbort("Unknown sequence type '%s'", name);
return 0;
}

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char* gfTypeName

(

enum gfType

type

)

Definition at line 7 of file aliType.c.

References gftDna, gftDnaX, gftProt, gftRna, gftRnaX, and internalErr.

Referenced by pslxWriteHead().

{
if (type == gftDna) return "DNA";
if (type == gftRna) return "RNA";
if (type == gftProt) return "protein";
if (type == gftDnaX) return "DNAX";
if (type == gftRnaX) return "RNAX";
internalErr();
return NULL;
}

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Variable Documentation

char const rcsid[] = "$Id: aliType.c,v 1.4 2003/05/06 07:33:41 kate Exp $" [static]

Definition at line 5 of file aliType.c.

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